Structural proteomics using NMR in RIKEN Structural Genomics/Proteomics Initiative

Structural Proteomics by NMR

Nuclear magnetic resonance (NMR) is a powerful spectroscopic technique that permits the detailed study at atomic resolution of the three-dimensional structure and dynamics of macromolecules and their complexes in solution. In this brief chapter, I discuss various aspects of NMR that are pertinent to structural proteomics, that is, the high-throughput study of protein–protein complexes at the at...

NMR in the SPINE Structural Proteomics project.

This paper describes the developments, role and contributions of the NMR spectroscopy groups in the Structural Proteomics In Europe (SPINE) consortium. Focusing on the development of high-throughput (HTP) pipelines for NMR structure determinations of proteins, all aspects from sample preparation, data acquisition, data processing, data analysis to structure determination have been improved with...

An NMR approach to structural proteomics.

The influx of genomic sequence information has led to the concept of structural proteomics, the determination of protein structures on a genome-wide scale. Here we describe an approach to structural proteomics of small proteins using NMR spectroscopy. Over 500 small proteins from several organisms were cloned, expressed, purified, and evaluated by NMR. Although there was variability among prote...

Computational structural proteomics.

Structural Proteomics of Herpesviruses.

Herpesviruses are highly prevalent viruses associated with numerous pathologies both in animal and human populations. Until now, most of the strategies used to prevent or to cure these infections have been unsuccessful because these viruses have developed numerous immune evasion mechanisms. Therefore, a better understanding of their complex lifecycle is needed. In particular, while the genome o...